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alphafold-database-fetch-and-analyze

Retrieve and analyze AlphaFold predicted structures for a protein.

Skill by myoung906

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Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.

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About

Retrieve and analyze AlphaFold predicted structures for a protein. Use when the user provides a specific UniProt Accession ID and wants structural confidence metrics (pLDDT), domain boundary analysis, or disorder assessment. Do not use if the user only has a protein name, gene name, or amino acid sequence — ask for a UniProt ID first.

Use cases: backend

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What's inside

Skill name
alphafold-database-fetch-and-analyze
Description
Retrieve and analyze AlphaFold predicted structures for a protein. Use when the user provides a specific UniProt Accession ID and wants structural confidence metrics (pLDDT), domain boundary analysis, or disorder assessment. Do not use if the user only has a protein name, gene name, or amino acid sequence — ask for a UniProt ID first.
License
unknown
Instructions
108 lines in SKILL.md · view on GitHub

Before installing

  • Ships executable scripts

Files (5)

  • SKILL.md
  • citation.bib · references/
  • analyze_pae.py · scripts/
  • analyze_plddt.py · scripts/
  • fetch_structure.py · scripts/

The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub

More from myoung906/MasVisio_Research

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Last commit (this folder)
Aug 17, 2026 (2 months ago)

From GitHub (fetched Oct 24, 2026).

Details

License
License unknown
Repository
github.com/myoung906/MasVisio_Research
First seen
Oct 24, 2026
Last checked
Oct 24, 2026
Source
GitHubgithub-graphql

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More from myoung906

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alphafold-database-fetch-and-analyze skill. Agent Mart. https://agentmart.dev/skills/myoung906-alphafold-database-fetch-and-analyze (last updated 2026-10-24)