foldseek-structural-search
Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API.
Skill by myoung906
Chalk Labs
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Install
Works with Claude Code, Claude apps, Codex, Cursor, Gemini CLI, GitHub Copilot, VS Code, OpenCode, Goose, Windsurf. Read the repository before you give any tool access to your data.
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About
Use cases: backend
Reviews
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What's inside
- Skill name
foldseek-structural-search- Description
- Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API. Use ONLY when the user provides a physical 3D coordinate file (.cif, .mmcif, or .pdb) and wants to find structurally similar proteins. Do NOT use if the user only provides a protein sequence, gene name, or UniProt ID.
- License
- unknown
- Instructions
- 91 lines in SKILL.md · view on GitHub
Before installing
- Ships executable scripts
Files (3)
- SKILL.md
- citation.bib · references/
- search.py · scripts/
The license isn't open source, so the instructions aren't shown here. Read SKILL.md on GitHub
Signals
- Stars
- 0
- Forks
- 0
- Open issues
- 0
- Last commit (this folder)
- Aug 17, 2026 (2 months ago)
From GitHub (fetched Oct 24, 2026).
Details
- License
- License unknown
- Repository
- github.com/myoung906/MasVisio_Research
- First seen
- Oct 24, 2026
- Last checked
- Oct 24, 2026
- Source
- GitHubgithub-graphql
Same skill elsewhere
Copies of this SKILL.md published by others; search shows only one of them.
- 0.540score
foldseek-structural-search
MarceloClaro
Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API.
SkillCFreshness: C★ 12Claude Code +9 - 0.372score
foldseek-structural-search
Marvellbrazil
Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API.
SkillAFreshness: A★ 5Claude Code +9 - 0.318score
foldseek-structural-search
hanyanphysics
Performs 3D structural searches of proteins against various databases (PDB, AlphaFold, CATH, MGnify, etc.) using the Foldseek API.
SkillCFreshness: C★ 5Claude Code +9
More from myoung906
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Cite this page
foldseek-structural-search skill. Agent Mart. https://agentmart.dev/skills/myoung906-foldseek-structural-search (last updated 2026-10-24)